HL_7P7Q_061

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGUAGUCG

Length

8 nucleotides

Bulged bases

7P7Q|1|A|G|2542

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7Q_061 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.1049

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

7P7Q|1|A|U|2541
7P7Q|1|A|G|2542
7P7Q|1|A|U|2543
7P7Q|1|A|A|2544
7P7Q|1|A|G|2545
7P7Q|1|A|U|2546
7P7Q|1|A|C|2547
7P7Q|1|A|G|2548

Current chains

Chain A

23S rRNA

Nearby chains

Chain 8

50S ribosomal protein L36

Chain K

50S ribosomal protein L6