HL_7P7R_013

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGACCAUC

Length

8 nucleotides

Bulged bases

7P7R|1|A|G|450

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_013 not in the Motif Atlas

Homologous match to HL_5J7L_146

Geometric discrepancy: 0.0606

The information below is about HL_5J7L_146

Detailed Annotation

Pseudoknot geometry

Broad Annotation

No text annotation

Motif group

HL_30680.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7P7R|1|A|G|449
7P7R|1|A|G|450
7P7R|1|A|A|451
7P7R|1|A|C|452
7P7R|1|A|C|453
7P7R|1|A|A|454
7P7R|1|A|U|455
7P7R|1|A|C|456

Current chains

Chain A

23S rRNA

Nearby chains