HL_7P7R_020

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAUAG

Length

7 nucleotides

Bulged bases

7P7R|1|A|U|683

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_020 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.1166

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7P7R|1|A|U|679
7P7R|1|A|G|680
7P7R|1|A|A|681
7P7R|1|A|A|682
7P7R|1|A|U|683
7P7R|1|A|A|684
7P7R|1|A|G|685

Current chains

Chain A

23S rRNA

Nearby chains

Chain 5

50S ribosomal protein L33 3

Chain 7

50S ribosomal protein L35

Chain O

50S ribosomal protein L15