HL_7P7R_025

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUCUCG

Length

7 nucleotides

Bulged bases

7P7R|1|A|C|928

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_025 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2176

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.4

Basepair signature

cWW-F

Number of instances in this motif group

48

Unit IDs

7P7R|1|A|C|925
7P7R|1|A|A|926
7P7R|1|A|U|927
7P7R|1|A|C|928
7P7R|1|A|U|929
7P7R|1|A|C|930
7P7R|1|A|G|931

Current chains

Chain A

23S rRNA

Nearby chains

Chain n

30S ribosomal protein S13