HL_7P7R_047

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

7P7R|1|A|U|1883, 7P7R|1|A|C|1884

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_047 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.2681

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.9

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7P7R|1|A|C|1881
7P7R|1|A|U|1882
7P7R|1|A|U|1883
7P7R|1|A|C|1884
7P7R|1|A|G|1885
7P7R|1|A|G|1886

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

ARE-ABC-F family resistance factor PoxtA

Chain F

50S ribosomal protein L1