HL_7P7R_063

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_063 not in the Motif Atlas

Homologous match to HL_7A0S_062

Geometric discrepancy: 0.0684

The information below is about HL_7A0S_062

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7P7R|1|A|C|2607
7P7R|1|A|G|2608
7P7R|1|A|U|2609
7P7R|1|A|G|2610
7P7R|1|A|A|2611
7P7R|1|A|G|2612

Current chains

Chain A

23S rRNA

Nearby chains

Chain 0

ARE-ABC-F family resistance factor PoxtA

Chain G

50S ribosomal protein L2