HL_7P7R_085

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UAGUAACUGA

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_085 not in the Motif Atlas

Geometric match to HL_4TUE_223

Geometric discrepancy: 0.3513

The information below is about HL_4TUE_223

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7P7R|1|a|U|488
7P7R|1|a|A|489
7P7R|1|a|G|490
7P7R|1|a|U|491
7P7R|1|a|A|492
7P7R|1|a|A|493
7P7R|1|a|C|494
7P7R|1|a|U|495
7P7R|1|a|G|496
7P7R|1|a|A|497

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S16