HL_7P7R_106

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGAAAUU

Length

7 nucleotides

Bulged bases

7P7R|1|A|A|820, 7P7R|1|A|U|823

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_106 not in the Motif Atlas

Homologous match to HL_5J7L_156

Geometric discrepancy: 0.1289

The information below is about HL_5J7L_156

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

7P7R|1|A|A|818
7P7R|1|A|G|819
7P7R|1|A|A|820
7P7R|1|A|A|821
7P7R|1|A|A|822
7P7R|1|A|U|823
7P7R|1|A|U|824

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L2