HL_7P7U_053

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7P7U|1|A|G|2263

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7U_053 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.1083

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7P7U|1|A|C|2261
7P7U|1|A|U|2262
7P7U|1|A|G|2263
7P7U|1|A|G|2264
7P7U|1|A|G|2265
7P7U|1|A|G|2266
7P7U|1|A|C|2267
7P7U|1|A|G|2268
7P7U|1|A|G|2269

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Transfer RNA; tRNA

Chain P

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27