HL_7P7U_056
3D structure
- PDB id
- 7P7U (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome with P-tRNA, state IV
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAAAGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P7U_056 not in the Motif Atlas
- Homologous match to HL_4WF9_052
- Geometric discrepancy: 0.1326
- The information below is about HL_4WF9_052
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_52651.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
7P7U|1|A|U|2337
7P7U|1|A|G|2338
7P7U|1|A|U|2339
7P7U|1|A|A|2340
7P7U|1|A|A|2341
7P7U|1|A|A|2342
7P7U|1|A|G|2343
7P7U|1|A|G|2344
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain J
- 50S ribosomal protein L5
- Chain P
- 50S ribosomal protein L16
- Chain Y
- 50S ribosomal protein L27
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