HL_7P7U_063

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7U_063 not in the Motif Atlas

Homologous match to HL_7A0S_062

Geometric discrepancy: 0.0777

The information below is about HL_7A0S_062

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

7P7U|1|A|C|2607
7P7U|1|A|G|2608
7P7U|1|A|U|2609
7P7U|1|A|G|2610
7P7U|1|A|A|2611
7P7U|1|A|G|2612

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

Transfer RNA; tRNA

Chain G

50S ribosomal protein L2