HL_7P7U_085

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UAGUAACUGA

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7U_085 not in the Motif Atlas

Geometric match to HL_4TUE_223

Geometric discrepancy: 0.3492

The information below is about HL_4TUE_223

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_38491.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7P7U|1|a|U|488
7P7U|1|a|A|489
7P7U|1|a|G|490
7P7U|1|a|U|491
7P7U|1|a|A|492
7P7U|1|a|A|493
7P7U|1|a|C|494
7P7U|1|a|U|495
7P7U|1|a|G|496
7P7U|1|a|A|497

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S16