HL_7PD3_033
3D structure
- PDB id
- 7PD3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the human mitoribosomal large subunit in complex with NSUN4.MTERF4.GTPBP7 and MALSU1.L0R8F8.mt-ACP
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUAACACAAA
- Length
- 10 nucleotides
- Bulged bases
- 7PD3|1|B|A|1618, 7PD3|1|B|A|1620
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PD3_033 not in the Motif Atlas
- Geometric match to HL_4V88_198
- Geometric discrepancy: 0.2337
- The information below is about HL_4V88_198
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7PD3|1|B|U|1613
7PD3|1|B|U|1614
7PD3|1|B|A|1615
7PD3|1|B|A|1616
7PD3|1|B|C|1617
7PD3|1|B|A|1618
7PD3|1|B|C|1619
7PD3|1|B|A|1620
7PD3|1|B|A|1621
7PD3|1|B|A|1622
Current chains
- Chain B
- mt-tRNAVal
Nearby chains
- Chain 6
- 39S ribosomal protein L38, mitochondrial
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
Coloring options: