HL_7PHC_017
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- GUUUUGAAGUAU
- Length
- 12 nucleotides
- Bulged bases
- 7PHC|1|3|U|602, 7PHC|1|3|U|607
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PHC_017 not in the Motif Atlas
- Geometric match to HL_5ID6_001
- Geometric discrepancy: 0.2875
- The information below is about HL_5ID6_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7PHC|1|3|G|598
7PHC|1|3|U|599
7PHC|1|3|U|600
7PHC|1|3|U|601
7PHC|1|3|U|602
7PHC|1|3|G|603
7PHC|1|3|A|604
7PHC|1|3|A|605
7PHC|1|3|G|606
7PHC|1|3|U|607
7PHC|1|3|A|608
7PHC|1|3|U|609
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain k
- 50S ribosomal protein L15
- Chain p
- 50S ribosomal protein L20
- Chain q
- 50S ribosomal protein L21
- Chain y
- 50S ribosomal protein L32
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