HL_7PHC_021

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

AGUAACAU

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PHC_021 not in the Motif Atlas

Geometric match to HL_5J7L_154

Geometric discrepancy: 0.2569

The information below is about HL_5J7L_154

Detailed Annotation

GNRA with tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7PHC|1|3|A|747
7PHC|1|3|G|748
7PHC|1|3|U|749
7PHC|1|3|A|750
7PHC|1|3|A|751
7PHC|1|3|C|752
7PHC|1|3|A|753
7PHC|1|3|U|754

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain N

30S ribosomal protein S15