HL_7PHC_026

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

GGAUAAGC

Length

8 nucleotides

Bulged bases

7PHC|1|3|U|994, 7PHC|1|3|G|997

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PHC_026 not in the Motif Atlas

Geometric match to HL_7RQB_016

Geometric discrepancy: 0.2153

The information below is about HL_7RQB_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

7PHC|1|3|G|991
7PHC|1|3|G|992
7PHC|1|3|A|993
7PHC|1|3|U|994
7PHC|1|3|A|995
7PHC|1|3|A|996
7PHC|1|3|G|997
7PHC|1|3|C|998

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain l

50S ribosomal protein L16