HL_7PHC_043

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

AUGUAAAAGU

Length

10 nucleotides

Bulged bases

7PHC|1|3|A|1749

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PHC_043 not in the Motif Atlas

Geometric match to HL_7A0S_067

Geometric discrepancy: 0.3723

The information below is about HL_7A0S_067

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37889.2

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

13

Unit IDs

7PHC|1|3|A|1745
7PHC|1|3|U|1746
7PHC|1|3|G|1747
7PHC|1|3|U|1748
7PHC|1|3|A|1749
7PHC|1|3|A|1750
7PHC|1|3|A|1751
7PHC|1|3|A|1752
7PHC|1|3|G|1753
7PHC|1|3|U|1754

Current chains

Chain 3

23S ribosomal RNA

Nearby chains