HL_7PHC_087

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

GCGAUCCC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PHC_087 not in the Motif Atlas

Homologous match to HL_5J7L_018

Geometric discrepancy: 0.5483

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

7PHC|1|5|G|835
7PHC|1|5|C|836
7PHC|1|5|G|837
7PHC|1|5|A|838
7PHC|1|5|U|839
7PHC|1|5|C|840
7PHC|1|5|C|841
7PHC|1|5|C|842

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain A

30S ribosomal protein S2

Chain E

30S ribosomal protein S6

Chain Q

30S ribosomal protein S18