HL_7PHC_096

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

UGUAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PHC_096 not in the Motif Atlas

Homologous match to HL_6CZR_099

Geometric discrepancy: 0.2824

The information below is about HL_6CZR_099

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PHC|1|5|U|1240
7PHC|1|5|G|1241
7PHC|1|5|U|1242
7PHC|1|5|A|1243
7PHC|1|5|A|1244
7PHC|1|5|A|1245

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S13

Chain R

30S ribosomal protein S19