HL_7PHC_110

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

UUUAAG

Length

6 nucleotides

Bulged bases

7PHC|1|3|U|862, 7PHC|1|3|A|865

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PHC_110 not in the Motif Atlas

Homologous match to HL_4WF9_025

Geometric discrepancy: 0.3492

The information below is about HL_4WF9_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_27530.2

Basepair signature

cWW-F-F

Number of instances in this motif group

11

Unit IDs

7PHC|1|3|U|861
7PHC|1|3|U|862
7PHC|1|3|U|863
7PHC|1|3|A|864
7PHC|1|3|A|865
7PHC|1|3|G|866

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain k

50S ribosomal protein L15