HL_7PIA_008
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- UGGCGAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIA_008 not in the Motif Atlas
- Geometric match to HL_5NFV_001
- Geometric discrepancy: 0.3071
- The information below is about HL_5NFV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
7PIA|1|3|U|250
7PIA|1|3|G|251
7PIA|1|3|G|252
7PIA|1|3|C|253
7PIA|1|3|G|254
7PIA|1|3|A|255
7PIA|1|3|G|256
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain 8
- Transfer RNA; tRNA
- Chain k
- 50S ribosomal protein L15
- Chain v
- 50S ribosomal protein L28
Coloring options: