HL_7PIA_050
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- GUGAAGACAC
- Length
- 10 nucleotides
- Bulged bases
- 7PIA|1|3|A|2037, 7PIA|1|3|A|2038, 7PIA|1|3|G|2039, 7PIA|1|3|C|2041, 7PIA|1|3|A|2042
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIA_050 not in the Motif Atlas
- Geometric match to HL_4WF9_047
- Geometric discrepancy: 0.2324
- The information below is about HL_4WF9_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_78372.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
7PIA|1|3|G|2034
7PIA|1|3|U|2035
7PIA|1|3|G|2036
7PIA|1|3|A|2037
7PIA|1|3|A|2038
7PIA|1|3|G|2039
7PIA|1|3|A|2040
7PIA|1|3|C|2041
7PIA|1|3|A|2042
7PIA|1|3|C|2043
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain p
- 50S ribosomal protein L20
- Chain q
- 50S ribosomal protein L21
- Chain y
- 50S ribosomal protein L32
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