HL_7PIA_053
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 7PIA|1|3|G|2258
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIA_053 not in the Motif Atlas
- Homologous match to HL_5J7L_186
- Geometric discrepancy: 0.4327
- The information below is about HL_5J7L_186
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_85367.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7PIA|1|3|C|2256
7PIA|1|3|U|2257
7PIA|1|3|G|2258
7PIA|1|3|G|2259
7PIA|1|3|G|2260
7PIA|1|3|G|2261
7PIA|1|3|C|2262
7PIA|1|3|G|2263
7PIA|1|3|G|2264
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain l
- 50S ribosomal protein L16
- Chain u
- 50S ribosomal protein L27
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