HL_7PIA_117
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- GACUGAGACACGGC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIA_117 not in the Motif Atlas
- Homologous match to HL_4LFB_008
- Geometric discrepancy: 0.3132
- The information below is about HL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39665.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7PIA|1|5|G|316
7PIA|1|5|A|317
7PIA|1|5|C|318
7PIA|1|5|U|319
7PIA|1|5|G|320
7PIA|1|5|A|321
7PIA|1|5|G|322
7PIA|1|5|A|323
7PIA|1|5|C|324
7PIA|1|5|A|325
7PIA|1|5|C|326
7PIA|1|5|G|327
7PIA|1|5|G|328
7PIA|1|5|C|329
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain O
- 30S ribosomal protein S16
- Chain S
- 30S ribosomal protein S20
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