HL_7PIB_011
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GUGAUAGCC
- Length
- 9 nucleotides
- Bulged bases
- 7PIB|1|3|G|363, 7PIB|1|3|A|364, 7PIB|1|3|U|365
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_011 not in the Motif Atlas
- Geometric match to HL_4WF9_012
- Geometric discrepancy: 0.2183
- The information below is about HL_4WF9_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.5
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 17
Unit IDs
7PIB|1|3|G|361
7PIB|1|3|U|362
7PIB|1|3|G|363
7PIB|1|3|A|364
7PIB|1|3|U|365
7PIB|1|3|A|366
7PIB|1|3|G|367
7PIB|1|3|C|368
7PIB|1|3|C|369
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain c
- 50S ribosomal protein L4
- Chain t
- 50S ribosomal protein L24
Coloring options: