HL_7PIB_028
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CUUAGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 7PIB|1|3|A|1102, 7PIB|1|3|G|1103, 7PIB|1|3|A|1105
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_028 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.2853
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PIB|1|3|C|1099
7PIB|1|3|U|1100
7PIB|1|3|U|1101
7PIB|1|3|A|1102
7PIB|1|3|G|1103
7PIB|1|3|A|1104
7PIB|1|3|A|1105
7PIB|1|3|G|1106
7PIB|1|3|C|1107
7PIB|1|3|A|1108
7PIB|1|3|G|1109
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 9
- Elongation factor G
- Chain h
- 50S ribosomal protein L11
Coloring options: