HL_7PIB_029
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGUAACAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_029 not in the Motif Atlas
- Geometric match to HL_5J7L_154
- Geometric discrepancy: 0.3038
- The information below is about HL_5J7L_154
- Detailed Annotation
- GNRA with tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7PIB|1|3|C|1127
7PIB|1|3|G|1128
7PIB|1|3|U|1129
7PIB|1|3|A|1130
7PIB|1|3|A|1131
7PIB|1|3|C|1132
7PIB|1|3|A|1133
7PIB|1|3|G|1134
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L36
- Chain 9
- Elongation factor G
- Chain e
- 50S ribosomal protein L6
- Chain h
- 50S ribosomal protein L11
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