HL_7PIB_040
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GAACACAC
- Length
- 8 nucleotides
- Bulged bases
- 7PIB|1|3|A|1648, 7PIB|1|3|C|1649, 7PIB|1|3|A|1650, 7PIB|1|3|A|1652
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_040 not in the Motif Atlas
- Geometric match to HL_1WZ2_007
- Geometric discrepancy: 0.2255
- The information below is about HL_1WZ2_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.9
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7PIB|1|3|G|1646
7PIB|1|3|A|1647
7PIB|1|3|A|1648
7PIB|1|3|C|1649
7PIB|1|3|A|1650
7PIB|1|3|C|1651
7PIB|1|3|A|1652
7PIB|1|3|C|1653
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain m
- 50S ribosomal protein L17
- Chain r
- 50S ribosomal protein L22
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