HL_7PIB_048
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_048 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3151
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PIB|1|3|G|1917
7PIB|1|3|U|1918
7PIB|1|3|A|1919
7PIB|1|3|A|1920
7PIB|1|3|C|1921
7PIB|1|3|U|1922
7PIB|1|3|A|1923
7PIB|1|3|U|1924
7PIB|1|3|A|1925
7PIB|1|3|A|1926
7PIB|1|3|C|1927
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Small subunit ribosomal RNA; SSU rRNA
- Chain 7
- Transfer RNA; tRNA
- Chain 9
- Elongation factor G
Coloring options: