HL_7PIB_056
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGUAAUGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_056 not in the Motif Atlas
- Geometric match to HL_7RQB_056
- Geometric discrepancy: 0.231
- The information below is about HL_7RQB_056
- Detailed Annotation
- Pseudoknot geometry
- Broad Annotation
- No text annotation
- Motif group
- HL_12078.4
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
7PIB|1|3|U|2332
7PIB|1|3|G|2333
7PIB|1|3|U|2334
7PIB|1|3|A|2335
7PIB|1|3|A|2336
7PIB|1|3|U|2337
7PIB|1|3|G|2338
7PIB|1|3|G|2339
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain l
- 50S ribosomal protein L16
- Chain u
- 50S ribosomal protein L27
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