HL_7PIB_071
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_071 not in the Motif Atlas
- Homologous match to HL_5J7L_001
- Geometric discrepancy: 0.2489
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7PIB|1|5|U|13
7PIB|1|5|U|14
7PIB|1|5|U|15
7PIB|1|5|G|16
7PIB|1|5|A|17
7PIB|1|5|U|18
7PIB|1|5|C|19
7PIB|1|5|C|20
7PIB|1|5|U|21
7PIB|1|5|G|22
7PIB|1|5|G|23
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain D
- 30S ribosomal protein S5
- Chain K
- 30S ribosomal protein S12
Coloring options: