HL_7PIB_081

3D structure

PDB id

7PIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

7PIB|1|5|U|417, 7PIB|1|5|U|418, 7PIB|1|5|A|419

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PIB_081 not in the Motif Atlas

Geometric match to HL_1P6V_001

Geometric discrepancy: 0.3404

The information below is about HL_1P6V_001

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

7PIB|1|5|C|415
7PIB|1|5|U|416
7PIB|1|5|U|417
7PIB|1|5|U|418
7PIB|1|5|A|419
7PIB|1|5|A|420
7PIB|1|5|G|421

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain B

30S ribosomal protein S3

Chain C

30S ribosomal protein S4