HL_7PIB_097

3D structure

PDB id

7PIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UGUAAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PIB_097 not in the Motif Atlas

Homologous match to HL_6CZR_099

Geometric discrepancy: 0.3579

The information below is about HL_6CZR_099

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIB|1|5|U|1240
7PIB|1|5|G|1241
7PIB|1|5|U|1242
7PIB|1|5|A|1243
7PIB|1|5|A|1244
7PIB|1|5|A|1245

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S13

Chain R

30S ribosomal protein S19