HL_7PIR_006
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 7PIR|1|3|A|200, 7PIR|1|3|A|203
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIR_006 not in the Motif Atlas
- Geometric match to HL_2ZNI_001
- Geometric discrepancy: 0.3066
- The information below is about HL_2ZNI_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75660.8
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 23
Unit IDs
7PIR|1|3|G|198
7PIR|1|3|A|199
7PIR|1|3|A|200
7PIR|1|3|A|201
7PIR|1|3|C|202
7PIR|1|3|A|203
7PIR|1|3|U|204
7PIR|1|3|C|205
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain 8
- Transfer RNA; tRNA
- Chain k
- 50S ribosomal protein L15
- Chain v
- 50S ribosomal protein L28
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