HL_7PIR_009

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

UCAUUAGA

Length

8 nucleotides

Bulged bases

7PIR|1|3|G|287

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PIR_009 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.2012

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7PIR|1|3|U|281
7PIR|1|3|C|282
7PIR|1|3|A|283
7PIR|1|3|U|284
7PIR|1|3|U|285
7PIR|1|3|A|286
7PIR|1|3|G|287
7PIR|1|3|A|288

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain f

50S ribosomal protein L9

Chain v

50S ribosomal protein L28