HL_7PIR_029
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CGUAACAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIR_029 not in the Motif Atlas
- Geometric match to HL_5J7L_151
- Geometric discrepancy: 0.2723
- The information below is about HL_5J7L_151
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_80922.2
- Basepair signature
- cWW-tSH-F
- Number of instances in this motif group
- 3
Unit IDs
7PIR|1|3|C|1127
7PIR|1|3|G|1128
7PIR|1|3|U|1129
7PIR|1|3|A|1130
7PIR|1|3|A|1131
7PIR|1|3|C|1132
7PIR|1|3|A|1133
7PIR|1|3|G|1134
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L36
- Chain e
- 50S ribosomal protein L6
- Chain g
- 50S ribosomal protein L10
- Chain h
- 50S ribosomal protein L11
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