HL_7PIR_031

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PIR_031 not in the Motif Atlas

Geometric match to HL_1WZ2_007

Geometric discrepancy: 0.2135

The information below is about HL_1WZ2_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7PIR|1|3|C|1252
7PIR|1|3|G|1253
7PIR|1|3|U|1254
7PIR|1|3|G|1255
7PIR|1|3|A|1256
7PIR|1|3|G|1257

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain p

50S ribosomal protein L20

Chain q

50S ribosomal protein L21