HL_7PIR_054
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 7PIR|1|3|A|2276, 7PIR|1|3|C|2283
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIR_054 not in the Motif Atlas
- Geometric match to HL_4WF9_050
- Geometric discrepancy: 0.391
- The information below is about HL_4WF9_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
7PIR|1|3|C|2272
7PIR|1|3|U|2273
7PIR|1|3|A|2274
7PIR|1|3|A|2275
7PIR|1|3|A|2276
7PIR|1|3|A|2277
7PIR|1|3|G|2278
7PIR|1|3|G|2279
7PIR|1|3|U|2280
7PIR|1|3|A|2281
7PIR|1|3|A|2282
7PIR|1|3|C|2283
7PIR|1|3|G|2284
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 5S ribosomal RNA; 5S rRNA
- Chain l
- 50S ribosomal protein L16
- Chain u
- 50S ribosomal protein L27
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