HL_7PIR_105
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- UCUGAAGAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIR_105 not in the Motif Atlas
- Geometric match to HL_2ZZM_002
- Geometric discrepancy: 0.3863
- The information below is about HL_2ZZM_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_33487.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
7PIR|1|8|U|32
7PIR|1|8|C|33
7PIR|1|8|U|34
7PIR|1|8|G|35
7PIR|1|8|A|36
7PIR|1|8|A|37
7PIR|1|8|G|38
7PIR|1|8|A|39
7PIR|1|8|A|40
Current chains
- Chain 8
- tRNA-Phe
Nearby chains
- Chain 5
- Small subunit ribosomal RNA; SSU rRNA
- Chain H
- 30S ribosomal protein S9
- Chain L
- 30S ribosomal protein S13
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