HL_7PJS_046
3D structure
- PDB id
- 7PJS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- CGCAAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PJS_046 not in the Motif Atlas
- Geometric match to HL_4QLM_001
- Geometric discrepancy: 0.1379
- The information below is about HL_4QLM_001
- Detailed Annotation
- GNRA
- Broad Annotation
- GNRA
- Motif group
- HL_37824.8
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 352
Unit IDs
7PJS|1|A|C|1868
7PJS|1|A|G|1869
7PJS|1|A|C|1870
7PJS|1|A|A|1871
7PJS|1|A|A|1872
7PJS|1|A|G|1873
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: