HL_7PJU_014

3D structure

PDB id

7PJU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with tRNAs in hybrid state 2 (H2)

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

7PJU|1|A|C|490

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PJU_014 not in the Motif Atlas

Homologous match to HL_5J7L_148

Geometric discrepancy: 0.1237

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7PJU|1|A|C|487
7PJU|1|A|G|488
7PJU|1|A|G|489
7PJU|1|A|C|490
7PJU|1|A|G|491
7PJU|1|A|A|492
7PJU|1|A|G|493

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain S

Ribosomal protein L22