HL_7PJW_033

3D structure

PDB id

7PJW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 2 (H2-EF-G-GDP-Pi)

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PJW_033 not in the Motif Atlas

Homologous match to HL_7RQB_035

Geometric discrepancy: 0.1179

The information below is about HL_7RQB_035

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_87030.2

Basepair signature

cWW-F-F

Number of instances in this motif group

33

Unit IDs

7PJW|1|A|C|1363
7PJW|1|A|G|1364
7PJW|1|A|A|1365
7PJW|1|A|A|1366
7PJW|1|A|A|1367
7PJW|1|A|G|1368

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L34

Chain X

50S ribosomal protein L28