HL_7PJX_103
3D structure
- PDB id
- 7PJX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.5 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PJX_103 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.1109
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 50
Unit IDs
7PJX|1|v|G|31
7PJX|1|v|C|32
7PJX|1|v|U|33
7PJX|1|v|C|34
7PJX|1|v|A|35
7PJX|1|v|U|36
7PJX|1|v|A|37
7PJX|1|v|A|38
7PJX|1|v|C|39
Current chains
- Chain v
- P-site tRNA(fMet)
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain i
- 30S ribosomal protein S9
- Chain z
- mRNA
Coloring options: