HL_7PJY_051

3D structure

PDB id

7PJY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUG(OMG)GGCGG

Length

9 nucleotides

Bulged bases

7PJY|1|A|G|2250

QA status

Modified nucleotides: OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PJY_051 not in the Motif Atlas

Homologous match to HL_7A0S_052

Geometric discrepancy: 0.1044

The information below is about HL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

7PJY|1|A|C|2248
7PJY|1|A|U|2249
7PJY|1|A|G|2250
7PJY|1|A|OMG|2251
7PJY|1|A|G|2252
7PJY|1|A|G|2253
7PJY|1|A|C|2254
7PJY|1|A|G|2255
7PJY|1|A|G|2256

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain W

50S ribosomal protein L27

Chain w

Transfer RNA; tRNA