HL_7PKQ_010
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- CGGUCAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PKQ_010 not in the Motif Atlas
- Homologous match to HL_6CZR_086
- Geometric discrepancy: 0.4153
- The information below is about HL_6CZR_086
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
7PKQ|1|3|C|142
7PKQ|1|3|G|143
7PKQ|1|3|G|144
7PKQ|1|3|U|145
7PKQ|1|3|C|146
7PKQ|1|3|A|147
7PKQ|1|3|A|148
7PKQ|1|3|A|149
7PKQ|1|3|U|150
7PKQ|1|3|G|151
Current chains
- Chain 3
- S3 rRNA
Nearby chains
- Chain k
- uS11m
Coloring options: