HL_7PKQ_015
3D structure
- PDB id
- 7PKQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Small subunit of the Chlamydomonas reinhardtii mitoribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.2 Å
Loop
- Sequence
- GAAUUUACGC
- Length
- 10 nucleotides
- Bulged bases
- 7PKQ|1|3|G|385
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PKQ_015 not in the Motif Atlas
- Homologous match to HL_5J7L_021
- Geometric discrepancy: 0.2521
- The information below is about HL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7PKQ|1|3|G|377
7PKQ|1|3|A|378
7PKQ|1|3|A|379
7PKQ|1|3|U|380
7PKQ|1|3|U|381
7PKQ|1|3|U|382
7PKQ|1|3|A|383
7PKQ|1|3|C|384
7PKQ|1|3|G|385
7PKQ|1|3|C|386
Current chains
- Chain 3
- S3 rRNA
Nearby chains
- Chain 4
- Small subunit ribosomal RNA; SSU rRNA
- Chain i
- 30S ribosomal protein S9, chloroplastic
- Chain j
- Ribosomal_S10 domain-containing protein
Coloring options: