HL_7PNZ_014

3D structure

PDB id

7PNZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation c

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

GAUAAACCCC

Length

10 nucleotides

Bulged bases

7PNZ|1|A|C|1225

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PNZ_014 not in the Motif Atlas

Homologous match to HL_5J7L_021

Geometric discrepancy: 0.293

The information below is about HL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7PNZ|1|A|G|1217
7PNZ|1|A|A|1218
7PNZ|1|A|U|1219
7PNZ|1|A|A|1220
7PNZ|1|A|A|1221
7PNZ|1|A|A|1222
7PNZ|1|A|C|1223
7PNZ|1|A|C|1224
7PNZ|1|A|C|1225
7PNZ|1|A|C|1226

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain G

28S ribosomal protein S9, mitochondrial

Chain H

28S ribosomal protein S10, mitochondrial