HL_7PO1_010

3D structure

PDB id

7PO1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of human mitochondrial ribosome small subunit with IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PO1_010 not in the Motif Atlas

Geometric match to HL_5J7L_016

Geometric discrepancy: 0.1109

The information below is about HL_5J7L_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7PO1|1|A|C|1023
7PO1|1|A|G|1024
7PO1|1|A|A|1025
7PO1|1|A|A|1026
7PO1|1|A|A|1027
7PO1|1|A|G|1028

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 2

Coiled-coil-helix-coiled-coil-helix domain-containing protein 1

Chain L

28S ribosomal protein S15, mitochondrial

Chain Q

28S ribosomal protein S21, mitochondrial