HL_7PO2_002
3D structure
- PDB id
- 7PO2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.09 Å
Loop
- Sequence
- GCC(RSQ)AUACC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: RSQ
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PO2_002 not in the Motif Atlas
- Geometric match to HL_4TUE_034
- Geometric discrepancy: 0.1116
- The information below is about HL_4TUE_034
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
7PO2|1|5|G|31
7PO2|1|5|C|32
7PO2|1|5|C|33
7PO2|1|5|RSQ|34
7PO2|1|5|A|35
7PO2|1|5|U|36
7PO2|1|5|A|37
7PO2|1|5|C|38
7PO2|1|5|C|39
Current chains
- Chain 5
- fMet-tRNAMet
Nearby chains
- Chain 6
- mRNA
- Chain 7
- Translation initiation factor IF-2, mitochondrial
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain G
- 28S ribosomal protein S9, mitochondrial
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