HL_7PO2_011

3D structure

PDB id

7PO2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiation complex of human mitochondrial ribosome small subunit with IF2, fMet-tRNAMet and mRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.09 Å

Loop

Sequence

CCACCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PO2_011 not in the Motif Atlas

Geometric match to HL_4OQU_004

Geometric discrepancy: 0.3136

The information below is about HL_4OQU_004

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

7PO2|1|A|C|894
7PO2|1|A|C|895
7PO2|1|A|A|896
7PO2|1|A|C|897
7PO2|1|A|C|898
7PO2|1|A|G|899

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 6

mRNA

Chain D

28S ribosomal protein S5, mitochondrial

Chain J

28S ribosomal protein S12, mitochondrial

Chain O

28S ribosomal protein S18b, mitochondrial